Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTENTDETHLRETKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQGGGFIAFNLFLI
2AY0 Chain:A ((3-45))
------------------------------TTTMGVMLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLE-------------
General information:
TITO was launched using:
RESULT:
Template:
2AY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4487 for 198 contacts (-22.7/contact) +
2D Compatibility (PS) -4703 + (NN) -2741 + (LL) 2232
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -12899.0 ( -65.15 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_2AY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AY0-query.scw
PDB file :
Tito_Scwrl_2AY0.pdb
: