Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRASVLSALLLVGLGAAPKHSVSASDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKMVVIEDPDTKYNIPLVVSKDGNLVIGLSNIFFSNKSDDVKLVAETNQKIQALNATQQNSAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCPHCQKELTKLR-DHLK------ENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDI--------------------NAQ--KEP---EDLRTKVENTTKKIFESGVIKGVPFLYHYKA |
| 3GHA Chain:A ((19-170)) | -------------------------------------------------------------------------------------------------------------------------------------KGQPVL-GKD--DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVW--KED----PDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNI-QATPTIYVNDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41855 for 828 contacts (-50.5/contact) +
2D Compatibility (PS) -13238 + (NN) -6418 + (LL) 10384
1D Compatibility (HY) -400 + (ID) 1150
Total energy: -52677.0 ( -63.62 by residue)
QMean score : 0.520
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