Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQDLKEKPFIVSCWHGELGMIGFAYLRLQKPSVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPR--H-----------SIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVRYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA |
| 3P8K Chain:A ((50-100)) | ----------------------------------------------------------------------------------------------------------------MNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGEYVAEPFQLSDGTYVTQLICY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12275 for 163 contacts (-75.3/contact) +
2D Compatibility (PS) -4329 + (NN) -4977 + (LL) 8384
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -16047.0 ( -98.45 by residue)
QMean score : 0.696
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