Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
3OO0 Chain:B ((6-124))
LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG-YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTPATLEEKLNKIFEKLG
General information:
TITO was launched using:
RESULT:
Template:
3OO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69938 for 937 contacts (-74.6/contact) +
2D Compatibility (PS) -13175 + (NN) -8039 + (LL) -76
1D Compatibility (HY) -14400 + (ID) 3000
Total energy: -108628.0 ( -115.93 by residue)
QMean score : 0.741
(partial model without unconserved sides chains):
PDB file :
Tito_3OO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OO0-query.scw
PDB file :
Tito_Scwrl_3OO0.pdb
: