Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYD-EKITPFKEEVYAKGVLVLWS-E---NL----KMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIGFGALSLIDK-KDKNLSYF-IIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3GZG Chain:A ((22-253)) | --------------------TAPVTVFAAASLKESMDEAATAYEKA-TGTPVRVSYAASSALARQIEQGAPADVFLSADLEWMDYLQQHGLVLPAQRHNLLGNTLVLVAPASSKLRVDPRAPGAIAKALGEN-GRLAVGQTASVPAGSYAAAALRKLGQWDSVSNRLAESESVRAALMLVSRGEAPLGIVYGSDARADAKVRVVATFPDDSHD--AIVYPVAALKNSNNPA-TAAFVSWLGSKPAKAIFARRGFSLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98406 for 2036 contacts (-48.3/contact) +
2D Compatibility (PS) -23471 + (NN) -9035 + (LL) 2788
1D Compatibility (HY) -4000 + (ID) 2400
Total energy: -134524.0 ( -66.07 by residue)
QMean score : 0.518
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