Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYD--G---MSFNAFKEYKKRVFAKN-EKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQQNKLSYSSNSQKELYVEIENNQASIIMEK |
| 3CU3 Chain:A ((12-133)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TADESAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNS----QLALMLVVIRVILPGQTETSASRDSLPLYVVTKGDEGWQIEGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30118 for 787 contacts (-38.3/contact) +
2D Compatibility (PS) -12408 + (NN) -2825 + (LL) 13108
1D Compatibility (HY) 0 + (ID) 900
Total energy: -33143.0 ( -42.11 by residue)
QMean score : 0.479
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