Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDDVKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYRILRLLEKPINNNISEDMQSDIENFFVQANF-LEYYVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKKELFE---KYFQNIDEVTNKMLDQENQNKNSD- |
| 3Q9L Chain:A ((2-258)) | ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRV------------VYDFVNVIQGDAT--LNQAL-IKDKRTENLYILPASQTRD-----KDALTREGVA-KVLDDLKAMDFE------FIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASK--SRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50377 for 2015 contacts (-25.0/contact) +
2D Compatibility (PS) -24627 + (NN) -2248 + (LL) 2464
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -82038.0 ( -40.71 by residue)
QMean score : 0.267
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