Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKSSITAMLSAICPAFGA----IIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERF---FFAYKYFLDHAQKRVIYKEDPFLK-------------NYSKDAIVLEKKDIYNIQYILKDGEPYTSFELKNLGAFLVW----GLGEHNATNASLAILSALDE-LNLEEIRNNLLNFKGIKKRFDIL----------QKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVKRDIDLKAHFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM |
| 4HV4 Chain:B ((25-417)) | ----------------IHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDASFLHLQPMVAIVTNIEAD-------DFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPRVGRHITTYGFSDDADV-------QIASYRQEG-PQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVAVATEEGIEDEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDDYGHHPTEVDATIKAARAGW----PDKRIVMLFQPHRYTRTRDLYDDFANV-LSQVDVLLMLDVYAAGEPPIPGADSRALCRTIRNRGKLDPILVPDSESAPEMLAQILNGEDLILVQGAGNIGKIARKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158929 for 2861 contacts (-55.6/contact) +
2D Compatibility (PS) -37866 + (NN) -10635 + (LL) 2816
1D Compatibility (HY) -21600 + (ID) 6650
Total energy: -232864.0 ( -81.39 by residue)
QMean score : 0.428
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