Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMAW-GGLSSLEGASHFVIYLARKG-VTYDSDYVKKVMHEVKKRDYDTHSRFAQIIKNFQENDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMASFGYRNQEITPKTRWKTEVIYEVIE
3QDL Chain:A ((5-210))
-DQEKRRQLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTDKDLKKQIAAHSYFNEE-MIKSASALMVVCSLRPSELLP--------------------------------------MQRLESYILEQCYIAVGQICMGVSLMGLDSCIIGGFDPLKVGEVLEE----RINKPKIACLIALGKRVAEASQKSRKSKVDAITWL-
General information:
TITO was launched using:
RESULT:
Template:
3QDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57296 for 1219 contacts (-47.0/contact) +
2D Compatibility (PS) -18819 + (NN) -7526 + (LL) 3152
1D Compatibility (HY) -12400 + (ID) 2050
Total energy: -94939.0 ( -77.88 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3QDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QDL-query.scw
PDB file :
Tito_Scwrl_3QDL.pdb
: