Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEE----NFFIKANGLKELRAILQ-EKEGLKEWL--------------GVCAIALNDHLIDN---LDMPLKDGDVISLLPPVCGG
2L52 Chain:A ((5-99))
EVKVKLFANLREAAGTPELPLSGEKVIDVLLSLTDKYPALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPPVSGG
General information:
TITO was launched using:
RESULT:
Template:
2L52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58052 for 479 contacts (-121.2/contact) +
2D Compatibility (PS) -8321 + (NN) -1817 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -75340.0 ( -157.29 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_2L52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L52-query.scw
PDB file :
Tito_Scwrl_2L52.pdb
: