Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQ-EEGVREAIAKLDNTDFMGRTIRVTEANPKKS
3LPY Chain:A ((5-79))
---LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA-----
General information:
TITO was launched using:
RESULT:
Template:
3LPY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55831 for 489 contacts (-114.2/contact) +
2D Compatibility (PS) -8153 + (NN) -3499 + (LL) 72
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -74711.0 ( -152.78 by residue)
QMean score : 0.749
(partial model without unconserved sides chains):
PDB file :
Tito_3LPY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LPY-query.scw
PDB file :
Tito_Scwrl_3LPY.pdb
: