Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPLSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
2XBL Chain:D ((28-191))
---------------------ERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFGKQ
General information:
TITO was launched using:
RESULT:
Template:
2XBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107279 for 1397 contacts (-76.8/contact) +
2D Compatibility (PS) -18173 + (NN) -13221 + (LL) 2228
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -156145.0 ( -111.77 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_2XBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XBL-query.scw
PDB file :
Tito_Scwrl_2XBL.pdb
: