Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAV----EEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
3MBQ Chain:B ((45-160))
-------------LPAYETAGSAGMDLRAAVAEDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVKVLLINLGDDDFRIERGMRIAQAVFAPVIQPKIEERA--------------------
General information:
TITO was launched using:
RESULT:
Template:
3MBQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64795 for 730 contacts (-88.8/contact) +
2D Compatibility (PS) -11989 + (NN) -2704 + (LL) 1364
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -91474.0 ( -125.31 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3MBQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MBQ-query.scw
PDB file :
Tito_Scwrl_3MBQ.pdb
: