Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADF-KDFKFCVVEGDLQT-NRDADRLRKKGVSAHQITTGEACHLEASMIEGAFDLLKDEGA--LEKSDFLIIENVGNL----VCPSSY-------NLGAAMNIVLLSVPEGDDKVL---KYPTMFMCADAVIISKADMIEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF |
| 1NIJ Chain:A ((2-186)) | -------------------------------------------NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGE----AEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83960 for 1308 contacts (-64.2/contact) +
2D Compatibility (PS) -17904 + (NN) -4491 + (LL) 3604
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -110801.0 ( -84.71 by residue)
QMean score : 0.453
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