Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSPVNPIHTNANALNSGAKNEVKDAKNAPKSASKDFSKILNQKISKDKTAPKESPNHSALKATPKDAKEDAKALEKTPTLPHQHAQNLAKDQQAPTLKDWLNHPKTHPTAPHEAQHETHEANETNPKTPNETLSKNEKKPNEVASNAHQTNLPNKNPITPNHANNAIKNPTTPTHNVKDPKTLKDIQTLSQKHDLNASNIQAATTPENKNPLNASDHLALKTTQASINHTLTKNDAKNTANLSSVLQSLEKKEPQNKEHANPPNNEKKTPPLKEALQMNAIKRDKTLSKKKPEKTPIHAKTQTIAPSATPENAPKIPLKTLPLMPLIGANPPPNDNAPTPLEKEEKTKEISDNKEKAKETNSSAQSVQNTQASDKTSDNKSTTPKETIRHFTQQLKQEIQEYKPPMSKISMDLFPKELGKVEVTIQKVGKN-LKVSVISHN-NSLQTFLDNQQDLKNSLNALGFEGVDLSFSQDSSKEQQAPKDQPKEPFKEQELTPLKENALKSYQENTDHENQETSMQITLYA |
2JVF Chain:A ((32-83)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QELEKA---LARAGARNVQITISAENDEQAKELL---ELIARLLQKLGYKDINVRVNGTEVKIEVRV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12609 for 228 contacts (-55.3/contact) +
2D Compatibility (PS) -5420 + (NN) -1889 + (LL) 19844
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -4524.0 ( -19.84 by residue)
QMean score : 0.687
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