Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIAVFGGGAWGRALAFAFGEKNE-VKIIS-RRDLNEPLKK--LNDALISKGSAPIEQVDLERGLKAAL-----YVIAISVQHLREWFQNASLPKNAKVLIA------SKGIEVLNKAFVSEIAKDFIDPNALCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKTP-SFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILSRNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASELALLLKGKSVLESMNDLIRRA |
| 3K96 Chain:B ((32-336)) | --IAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFP-ETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-----VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLER |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177913 for 2505 contacts (-71.0/contact) +
2D Compatibility (PS) -31040 + (NN) -7027 + (LL) 560
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -238770.0 ( -95.32 by residue)
QMean score : 0.521
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