Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHY--RYIHHIHCPSKFIVEELEKY-NY-GGKKYAISNGFDPM-FKFEH-P--Q-----KSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRY--KQDIVLLLKGKGPDEKKIKLLAQKL--GVKTEF-GFVNSHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSL-FEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 2IW1 Chain:A ((2-371)) | -IVAFCLYKYFP-FGGLQRDFMRIASTVAARGHHVRVYTQSWEG-D--CPKAF--ELIQVPVKSHTNHGRNAEYYAWVQNHLK--EHPADRVVGFNKMPGL-DVYFAADVCYAEKVAQEKGFLYRLT--------S--RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTA-VCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134103 for 2867 contacts (-46.8/contact) +
2D Compatibility (PS) -38561 + (NN) -20614 + (LL) 2380
1D Compatibility (HY) -3200 + (ID) 2800
Total energy: -196898.0 ( -68.68 by residue)
QMean score : 0.410
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