Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCE--DFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--VQMTN-NHWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLE--ILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 2AP1 Chain:A ((24-326)) | ------AMYYGFDIGGTKIALGVFDST-RRLQWEKRVPTPHTSYSAFLDAVCELVEEADQR-FGVKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDR-DVRLDNDANCFALSEAWDDEF----------TQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYDQ------------SLQAPEIIALWE-QGDEQAHAHVERYLDLLAVCLGNILTIVDPD-LLVIGGGLSNF-TA-ITT-QLAERLPRHL-LP-VARAPRIERARHGDAGGMRGAAFLHLTD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161044 for 2467 contacts (-65.3/contact) +
2D Compatibility (PS) -30016 + (NN) -1318 + (LL) 2920
1D Compatibility (HY) -1600 + (ID) 2000
Total energy: -193058.0 ( -78.26 by residue)
QMean score : 0.283
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