Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK
4XO2 Chain:A ((1-60))
------------------------------------------MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIMLEH-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4XO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11936 for 263 contacts (45.4/contact) +
2D Compatibility (PS) -6085 + (NN) 3261 + (LL) 6256
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 13818.0 ( 52.54 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_4XO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XO2-query.scw
PDB file :
Tito_Scwrl_4XO2.pdb
: