Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKE--EPKQEP-APVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKLVK |
4B5C Chain:B ((18-134)) | ---------------------------------------------------TVDPLNDPNSPLAKR-----------SVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLVYQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3858 for 846 contacts (4.6/contact) +
2D Compatibility (PS) -11985 + (NN) -6580 + (LL) 4516
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -16741.0 ( -19.79 by residue)
QMean score : 0.450
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