Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ-NASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
2JEE Chain:A ((30-78))
-------------------EELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV------
General information:
TITO was launched using:
RESULT:
Template:
2JEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10211 for 185 contacts (55.2/contact) +
2D Compatibility (PS) -5317 + (NN) -3030 + (LL) 1800
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 1164.0 ( 6.29 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2JEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JEE-query.scw
PDB file :
Tito_Scwrl_2JEE.pdb
: