Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTATEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQNDWAEIEFSHETKGYVFLKLLKKAE |
| 3H41 Chain:A ((119-175)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------FVLVTKPTAILYINPSEKHKSL-EVSYNTRLPLLSEDTISYRVLLPNGQKAWLRKNDGTFYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30449 for 370 contacts (-82.3/contact) +
2D Compatibility (PS) -6075 + (NN) 2383 + (LL) 11424
1D Compatibility (HY) -400 + (ID) 400
Total energy: -23517.0 ( -63.56 by residue)
QMean score : 0.447
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