Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQDEYENLFCIVNSHAITLPIEPIFLKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGVIAFDETREGVFNLLNIYMLLSDESPEKIEERFRNKGYGDFKKELAEVVIQSLKPIQERYQE-ISDDEVKAVLNCGAEKARPLARATYQKAKELMGLI |
3FHJ Chain:E ((2-324)) | ---KTIFSGIQ-----TIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQ-----------VSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRY---FTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKS---------------PGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163617 for 2228 contacts (-73.4/contact) +
2D Compatibility (PS) -30365 + (NN) -10094 + (LL) 1596
1D Compatibility (HY) -30000 + (ID) 7800
Total energy: -240280.0 ( -107.85 by residue)
QMean score : 0.566
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