Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVIFSVSNALL--------------FVGVSYFINPLAFKLSLPFLIIL-GGYSYFKRFSSLAH--------FVVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLWVAGFD---LLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALICWLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYK-NIPKAFFVSNGYLGV----VFFIFIVLDVGFKHA- |
| 4AUI Chain:A ((20-327)) | -DVTLYGTIKAGVETSRSVAHHGAQADRVKTATEIADLGSKIGFKGQEDL---------GNGLKAIWQLEQKAYVSGTDTGWGNRQSFIGLKGGFGKVRVGRLNNILKDTGNFNPWEGKSYYSGLSNIAQPEERHVSVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYHAGFNYKNDGFFVQYAGSYKRHNYTT-EKHQVHRLVGGYDHDALYASVAVQQQDAKLTWRDDNSHNSQTEVATTVAYRFG-NVTPRVSYAHGFKGSV------YDADHDNTYDQVVVGAEYDFSKRTSALVSAGWLQKGKGAEKFVATVGGVGLRHKF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151274 for 1966 contacts (-76.9/contact) +
2D Compatibility (PS) -29076 + (NN) 6083 + (LL) 2148
1D Compatibility (HY) 9200 + (ID) 2300
Total energy: -165219.0 ( -84.04 by residue)
QMean score : -0.087
|
|
|