Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEFILKIQAKDSKGLVSAISATIANKGYNIVKNDEFVDPLKQRFFMRLKIQKEMKPLNTEIKEQEERSLKTALFKALENFSELLIEVILTHKKNIILLATKESHCLGDLLLRVYGGELNAQILGVISNHEILRPL--VEKFDIPYFYAPCVDQILHEKEV-LATIKDLELKHKVSADLLVLAKYMRILSHDFTKRYENQILNIHHSFLPAFIGANPYQQAFERGVKVIGATAHFVNESLDAGPIILQDTLPINHNYSVEKMRLAGKDIEKLVLARALKLVLEDRVFVHENKTVVF |
1MEN Chain:B ((38-210)) | -----------------------------------------------------------------------------------------------------------------------SAQIDIVISNKAAVAGLDKAERAGIPTRV---INHKLYKNRVEFDSAIDLVLE-EFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99917 for 1216 contacts (-82.2/contact) +
2D Compatibility (PS) -18027 + (NN) -6267 + (LL) 10660
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -131251.0 ( -107.94 by residue)
QMean score : 0.399
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