Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKN-ALSFSLKGD--FDCP-LEENSLFKALQVLKKFLVQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFFQ------AKEWLKKTSLECLKTYDRNELNDLLKPALRTNPALKDIESQL---S-KEWFFSGSGSAFFRLKNTQKGANETHCQQ |
| 3PYF Chain:A ((5-271)) | -SVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVS-LVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVG----------RAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGG-TALGTGRGEELATVLS-RNTFHWVLAFA-DSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73644 for 2101 contacts (-35.1/contact) +
2D Compatibility (PS) -26697 + (NN) -3965 + (LL) 900
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -114506.0 ( -54.50 by residue)
QMean score : 0.345
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