Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVL--ILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTI------MGSV---------VLLIPIESLIGLTVWFFVGKVLKISSLASI-LGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL-------------- |
4MB0 Chain:A ((9-261)) | PRYWSLYYREKIIEGMEKGMTAKAGLIAHGRGEAFDYLI----GERTIEPAERAMRAAVAKLLLAENPVVSVNGNVAALVPKETIELARALNAKLEINLF--YRTEDRVKAIAEELRK-YDPEIELLGINPTKRIPGLEHERGKVDENGIWKADVVVVPLEDGDRTEALVRMGKFVITIDLNPLSRSARMADITIVDNIVRAYPRMTELAREMKDYSRGELIRIIEEYDNGKTLNDVLLHIRDRLTKLAEGGIWRKKQLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201663 for 1783 contacts (-113.1/contact) +
2D Compatibility (PS) -21233 + (NN) 3549 + (LL) 668
1D Compatibility (HY) -1200 + (ID) 2050
Total energy: -221929.0 ( -124.47 by residue)
QMean score : 0.243
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