Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNEMSVLALENLRVLLSEHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
3N3Y Chain:C ((9-216))
MEVICKHYTPLDIASQAIRTCWQSFEYSD-GGCKDKELIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAREFLVFVDNEKVNAMSVLALENLRVLLSEHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPGEHQYLFEDCLKH
General information:
TITO was launched using:
RESULT:
Template:
3N3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91710 for 1538 contacts (-59.6/contact) +
2D Compatibility (PS) -22108 + (NN) -9098 + (LL) -76
1D Compatibility (HY) -29600 + (ID) 10050
Total energy: -162642.0 ( -105.75 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3N3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N3Y-query.scw
PDB file :
Tito_Scwrl_3N3Y.pdb
: