Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIVEVMEDIDAQAKALEVDASKKLAKMQETLDFIKERLKNVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
4LS3 Chain:B ((1-301)) | -------------------------------QEVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIAEVMEDIDTQAKALEVDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167068 for 2531 contacts (-66.0/contact) +
2D Compatibility (PS) -32107 + (NN) -12466 + (LL) 2808
1D Compatibility (HY) -44400 + (ID) 14600
Total energy: -267833.0 ( -105.82 by residue)
QMean score : 0.600
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