Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK
3DH3 Chain:A ((4-57))
--------DSSVRLNKYISESGIC-SRREADRYIEQGNVFLNGKRA-TIGDQVKPGDVVKVNGQ---------
General information:
TITO was launched using:
RESULT:
Template:
3DH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30719 for 361 contacts (-85.1/contact) +
2D Compatibility (PS) -5578 + (NN) -1209 + (LL) 1216
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -40490.0 ( -112.16 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3DH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DH3-query.scw
PDB file :
Tito_Scwrl_3DH3.pdb
: