Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHT-AILTAVNRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 3GON Chain:A ((1-328)) | ------MIAVKTCGKLYWAGEYAILE-PGQLALIKDIPIYMRAEIAFSDSYR--IYSDMFDFAV-----DLRPNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMER-EGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGF-SISQVKPTLECDFLVGWTKEVAVSSHMVQQIKQNIN------QNFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLST----DIYTPLLRQLKEASQDLQAVAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELLYQER------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171578 for 2866 contacts (-59.9/contact) +
2D Compatibility (PS) -36083 + (NN) -19231 + (LL) 1896
1D Compatibility (HY) -25200 + (ID) 4800
Total energy: -254996.0 ( -88.97 by residue)
QMean score : 0.483
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