Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTEEMGVTDVLDAYMAVYSP---VNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLIIPLSLGE-S------LEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
3MTQ Chain:A ((3-131))
RHYIFASHGSFANGLLNSVELILGKQPDIHTLCAYVEEE-VDLTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRFLS-RPHFHLLSGLNLPLIIDLLISAAEDNTEKLITEALTNAKESIQYCNQTIA------------
General information:
TITO was launched using:
RESULT:
Template:
3MTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86408 for 828 contacts (-104.4/contact) +
2D Compatibility (PS) -12982 + (NN) -3717 + (LL) 632
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -113875.0 ( -137.53 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_3MTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MTQ-query.scw
PDB file :
Tito_Scwrl_3MTQ.pdb
: