Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTFFDKARELTEELEKTQAESIHQAAKLVADSIMNDGIIQAFGSGHSYAAAIEVCGRAGGLIPSKVIMDPAGG---------YYESIEGVGSLLTHRLQAKPNDIFFLISNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSVQGDAALELEGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGY-EYNFAIEDKFADRIFHL
3CVJ Chain:A ((26-237))
-----------------QAIIKGAHLVSEAVMN----GGRFYVFGSGHSHMIAEEIYNRAGGLALVTAILPPELMLHERPNKSTYLERIEGLSKSYLKLHQVTNKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAPVGDAGFQIANSEIYSGATSDSIGCFLAQALIVETLHLLVQQGFEPPVFKS-SNVDGADLYNDKIF----------
General information:
TITO was launched using:
RESULT:
Template:
3CVJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101776 for 1692 contacts (-60.2/contact) +
2D Compatibility (PS) -22502 + (NN) -14299 + (LL) 2872
1D Compatibility (HY) -9600 + (ID) 3750
Total energy: -149055.0 ( -88.09 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3CVJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CVJ-query.scw
PDB file :
Tito_Scwrl_3CVJ.pdb
: