Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFG-----KHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE--ETLRMRLLEEGEWGLDFILKTRFGDGFRATSA-----GMTRWTDGLVGGMDDAIARV-------HNQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFS-FRGNNAILLSAGKAASIAGKILK-----DKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE---------ITGEIPVGMETF-RNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 1G87 Chain:A ((4-443)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNYGEALQKSIMFYEFQRSGDL-PADKRDNWRDDSGMKDG---SDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPA----EVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGY----TAASGYYSS--SSFYDDLSWAAVWLYLATNDSTYLDKAESYVPNWGKEQQTDII------AYKWGQCWDDVHYGAELLLA----------------KLTN----KQLYKDSIEMNLDFWTTG---VNGTRVSYT-------------------------PKGL--------------------AWLFQW-GSLRHATTQAFLAGVYAEWEGCTPSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSWTDQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97004 for 3827 contacts (-25.3/contact) +
2D Compatibility (PS) -42499 + (NN) -20076 + (LL) 24576
1D Compatibility (HY) 400 + (ID) 3450
Total energy: -138053.0 ( -36.07 by residue)
QMean score : 0.371
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