Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKIDLEQIYILDF------TMGLRFHPLIIRKNLPLLYVAFIFLIWIQGVVMAGLPGDFDTTELDVLLAAIPALPLLILYPKKMAMKFQNVQYL---LYVCFN
2RJI Chain:A ((1-84))
DDSTTKELIKKLAEINKCENEISAKYCDHMIHEEIP--------------------LKTCTKEKTRNLCCAVSDYCMSYFTYDSEEYYDCTKREFDDPSYTCFR
General information:
TITO was launched using:
RESULT:
Template:
2RJI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49130 for 485 contacts (-101.3/contact) +
2D Compatibility (PS) -8096 + (NN) -5556 + (LL) 2676
1D Compatibility (HY) -800 + (ID) 500
Total energy: -61406.0 ( -126.61 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_2RJI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RJI-query.scw
PDB file :
Tito_Scwrl_2RJI.pdb
: