Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 3OTO Chain:U ((2-25)) | -------------------------------------GKGDRRTRRGKIWRGTYGKYRPRK----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5754 for 115 contacts (50.0/contact) +
2D Compatibility (PS) -2355 + (NN) -82 + (LL) 17104
1D Compatibility (HY) 800 + (ID) 250
Total energy: 20971.0 ( 182.36 by residue)
QMean score : -0.040
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