Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVA---AISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
4LVI Chain:A ((1-194)) | SYMVARMQKMKAGNLGGAFKHNERVSNKD-----------------------------------------------------------------------INPSRSHLNYELTDRDRSVSYEKQIKDYVNENK-VSNRAIRKDAVLCDEWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYG-----ESNIAYASVHL----DESTPHMHMGVVPFENGKLSSKAMFDREELKHIQEDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185522 for 1332 contacts (-139.3/contact) +
2D Compatibility (PS) -20028 + (NN) -1639 + (LL) 6444
1D Compatibility (HY) 2800 + (ID) 1150
Total energy: -199095.0 ( -149.47 by residue)
QMean score : 0.220
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