Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNETD-L-A-GVEKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVSICRELKVKI
2OPA Chain:A ((3-36))
-----------------------------------------------------------VTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEE---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OPA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3942 for 111 contacts (-35.5/contact) +
2D Compatibility (PS) -3368 + (NN) -2860 + (LL) 9620
1D Compatibility (HY) -800 + (ID) 300
Total energy: -1650.0 ( -14.86 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_2OPA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OPA-query.scw
PDB file :
Tito_Scwrl_2OPA.pdb
: