Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKTKQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGAILFADNKKLYFYDEKSWYVKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALTISYKGKEPVSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKA---SVDTNKINS----------FSSIAMNAYD--SRILTEVVGVVDGD |
| 4TXD Chain:A ((21-369)) | KRDVLAELGLGDLRPYLRSIG----------DKDRIFP---KAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDS--LDEVSKRWLVQEVIGKAKDL--GFKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHNEKF--GGLSIGIKTRVRFDPAFATQR-RITPETHN---------KVTEGHLSMTGQALF------------------------SEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYG----TVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8867 for 2562 contacts (-3.5/contact) +
2D Compatibility (PS) -32608 + (NN) 5160 + (LL) 3340
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -44375.0 ( -17.32 by residue)
QMean score : 0.147
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