Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYG-DRKYLYVSTTG-LSGHFDNSNYAAWALRQVTIM-------------------------------------------------------------------------------------------------------------------------------------------- |
4O6D Chain:A ((19-377)) | LYFQSNADTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPET--PQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEAVKDELNTLLKENGV------------DLSVVVEKQEGMYKSAPKRLTATANN---TFVVDGPETKECPTQNRAWNSLEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNNLAIHSDLSYWIESRLNDTWKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10960 for 1124 contacts (9.8/contact) +
2D Compatibility (PS) -17151 + (NN) 646 + (LL) 684
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -10811.0 ( -9.62 by residue)
QMean score : 0.279
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