Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKEL-GASFTRKDQELERSMGLGGK |
1NWB Chain:A ((2-101)) | QEQAQQFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAELDYVVDFMGGGFTIRNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13983 for 645 contacts (21.7/contact) +
2D Compatibility (PS) -9414 + (NN) 1741 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 450
Total energy: 2260.0 ( 3.50 by residue)
QMean score : 0.069
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