Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MINSRFYEGFE---GEAELSFVAGDNKLLIWNGYFETILDNLLDCNVEREGVLKEYFNHEGWY--DDSPWMIEDN----SLTII------QLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE---
1HL6 Chain:B ((4-146))
EDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFKIKP
General information:
TITO was launched using:
RESULT:
Template:
1HL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22757 for 749 contacts (-30.4/contact) +
2D Compatibility (PS) -12339 + (NN) -1051 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -40447.0 ( -54.00 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1HL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HL6-query.scw
PDB file :
Tito_Scwrl_1HL6.pdb
: