Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKFDLENGYVVKADGEMLVGGKFVVFKDSMKNWEPPYENKKLSESEVQEIIQQVKQSTNENTVQISFE
2HO2 Chain:A ((2-34))
--SDLPAGWMRVQDTS---GTYYWHIPTGTTQWEPPGR------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -644 for 155 contacts (-4.2/contact) +
2D Compatibility (PS) -3578 + (NN) -2389 + (LL) 3392
1D Compatibility (HY) -800 + (ID) 450
Total energy: -4469.0 ( -28.83 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2HO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HO2-query.scw
PDB file :
Tito_Scwrl_2HO2.pdb
: