Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQGIEFGKTVIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSLVDVDYTFDRNKIIFYFTAEGRVDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYEQAKREMPDVGVKVKTPEGAEARVSGINLLSRILQVSLPEEETVIEYELDELRPYNEFLKQPAKS |
| 3AF5 Chain:A ((29-74)) | --------------------------------------------------------------------------------------------------EAKITEIEF--EGPELVIYVKNPE----GELIKDLAKVLKKRISVRP------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21954 for 207 contacts (-106.1/contact) +
2D Compatibility (PS) -4180 + (NN) 677 + (LL) 16316
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -14941.0 ( -72.18 by residue)
QMean score : 0.500
|
|
|