Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
1EX4 Chain:A ((61-152))
------------VKTIHTDNGSNFTGATVRAACDWAGIKQEDGIP---QSQGVVESMNKELKKIIGQVR----DQAEHLKTAVQMAVFIHNK-KRKGGIGGYSAGERIV---
General information:
TITO was launched using:
RESULT:
Template:
1EX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1630 for 456 contacts (-3.6/contact) +
2D Compatibility (PS) -8999 + (NN) -2107 + (LL) 1412
1D Compatibility (HY) 3200 + (ID) 650
Total energy: -8774.0 ( -19.24 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_1EX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX4-query.scw
PDB file :
Tito_Scwrl_1EX4.pdb
: