Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPSVFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL
3PGG Chain:A ((26-69))
----IILPLALIDKCIGNRIYVVMKGDK----EFSGVLRGF--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1213 for 136 contacts (-8.9/contact) +
2D Compatibility (PS) -3356 + (NN) 412 + (LL) 3816
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -2691.0 ( -19.79 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_3PGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PGG-query.scw
PDB file :
Tito_Scwrl_3PGG.pdb
: