Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVK---QGDMKINATGTGAISPVNTQ--VPD---YDELQLVAQMDELDIPNIKK----DQ---------EVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIIS-LDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 1VF7 Chain:A ((123-262)) | ---------------------------AAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGMFVHAQLQEG------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6805 for 598 contacts (-11.4/contact) +
2D Compatibility (PS) -12383 + (NN) 1885 + (LL) 8168
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -11985.0 ( -20.04 by residue)
QMean score : 0.329
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