Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVAS-VILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLK----DTNVRTI-YVETKSAEDVDFVVNTLESRLAIKF----GDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIF-----SFVFSLCIGVIFGIAPANKASKLRPIDALRSE--- |
| 3BV6 Chain:A ((27-379)) | -KVNEITRESWILSTFPEWGTWLNEEIEQTVVEPNTFSMWWLGC------------------TGIWLKSAGNTNLSIDFWCG----TGKKTQKNRLMNTQHQMMRMGGVEALQ---PNLRTSIFPLDPFA---IKEIDAVL----------ASHDHADHID------------VNVAAAVLQNCGEHV-----KFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGG--SVYHSGDSHYSNYYAKHGND-------YQIDVALLSYGENPR--GVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDKGRMHYQHFRGFQDIFKNEPELPYKAFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123201 for 2682 contacts (-45.9/contact) +
2D Compatibility (PS) -36111 + (NN) -9167 + (LL) 3020
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -167659.0 ( -62.51 by residue)
QMean score : 0.151
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