Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRA----NLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTYL-------PG--FANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVA------K-RF----CSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
| 1OLP Chain:A ((3-244)) | --------------------------------------------------------GKEDGTGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKNLHKFQLGSTFPDYDPNA--YSLYQDHFWDPDTDHNFTQDNKWYLSYAVPDNAESQTRKFATLAKNEWDKGNYEKAAWYLGQGMHYFGDLNTPYHAANVTAVD--SPGHVKFETYAEERKDTYRLDTTGYNTDDAFYKDTLKNDNFNEWSKGYCKYWAKKAKNLYYSHATMSNSW----------DDWEYAASHGVGNAQKGVAGYLYRFLNDVS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OLP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12034 for 1866 contacts (-6.4/contact) +
2D Compatibility (PS) -22767 + (NN) -8057 + (LL) 4628
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -46330.0 ( -24.83 by residue)
QMean score : 0.288
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