Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
1Y2I Chain:A ((1-108))
MQFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRRN--
General information:
TITO was launched using:
RESULT:
Template:
1Y2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5758 for 701 contacts (8.2/contact) +
2D Compatibility (PS) -11593 + (NN) -3474 + (LL) 248
1D Compatibility (HY) 5200 + (ID) 350
Total energy: -4211.0 ( -6.01 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_1Y2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y2I-query.scw
PDB file :
Tito_Scwrl_1Y2I.pdb
: